When Nature Calls, even intrepid travels prefer a comfortable reply.

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bathrooms in tokyo, japan The Wedding Palace
Unsure, but it is a well known location.
Rating: Excellent  
Hours:Business hours  
Gender:Western +++++  
Fee:Free  
Details: clean
safe
handicap access
aesthetically special
 
Style: Western +++++  
Comments: Gorgeous setting. a stream meanders alongside the pathway/hall the ceiling of which is adorned with antique fan paintings. High tech, touch free throne, plays music and delivers a warm spray of water to cleanse and a warm air to dry, whilst you are still seated. No paper needed. Nice!!!
Tokyu Hands, Shinjuku
Next to Shinjuku Station
Rating: GOOD  
Hours:Business hours  
Gender:Western  
Fee:free  
Details: clean
safe
aesthetically special
 
Style: Western +++++  
Comments: Very much like the one in Osaka, except you get a nice panoramic view of the neighboring skyscrapers and bustling Shinjuku station.
Train stations
everywhere
Rating: BAD  
Hours:24hr  
Gender:squat  
Fee:free  
Details: safe
 
Style: Western +++++  
Comments: Generally the subway bathrooms are less disgusting than the JR ones- some are fairly clean these days, but I can't agree that train stations are a good place to pee! Try department stores if you're near one - they usually have heated seats!
Isetan Department Stores
Rating: GOOD  
Hours:Business hours  
Gender:Western and Traditional  
Fee:free  
Details: clean
safe
changing table
 
Style: Western +++++  
Comments: Any Isetan Department store is going to have a meticulously clean bathroom that caters to to their customer.
Canadian Embassy
7-3-38 Akasaka, Minato-ku, Tokyo
Rating: GOOD  
Hours:Business hours  
Gender:Western  
Fee:free  
Details: clean
safe
handicap access
aesthetically special
 
Style: Western +++++  
Comments: Beautiful fountain and huge picture window right beside the urinals in the men's loo. You can see out, but no one can see in!
Narita Airport
Rating: GOOD  
Hours:24hr  
Gender:Western  
Fee:free  
Details: clean
safe
aesthetically special
 
Style: Western +++++  
Comments: At arrivals area. Beautiful
Meguro Gajoen (also known as Arco Centre)
1-8-1 ShimoMaguro, Meguro-ku
Rating: Excellent  
Hours:24 hours  
Gender:Western  
Fee:Free  
Details: clean
safe
aesthetically special
 
Style: Western +++++  
Comments: There is a stream running through the bathroom, with a small oriental bridge to cross. The most amazing toilet area ever. Take your camera, it is worth a trip just to see. Enter via the new hotel.
Meiji Shrine Grounds
Harajuku
Rating: BAD  
Hours:24hr  
Gender:squat  
Fee:free  
Details:  
Style: Western +++++  
Comments: You don't need to read the signs to know you are near these washrooms as you can smell them 100 yards away: given that they are well ventilated that is really saying something! Absolutely filthy.